Interactive scatter plot¶
I recently came across this nice paper from John McLean's lab at Vanderbilt which discusses how we can use a relatively large (~4000 values) database of measured standards in omics studies. They have created a R Shiny app which provides interactivity to explore the dataset. Since I have been recently improving ORIGAMI's interactive capabilities, I've decided to embed their dataset in ORIGAMI and export it as a self-sufficient HTML document. This took me about ~10 minutes altogether (mostly rearranging columns and annotating text document). I think the results are quite close to the original publication (Figure 2a).
You can have a look at the way the data is structured below.
Download formatted data¶
You can download the data used for this figure from here.